Index A | C | F | G | M | O | P | R | S | U A add_dovetails() (gfagraphs.graph.Graph method) add_edge() (gfagraphs.graph.Graph method) add_node() (gfagraphs.graph.Graph method) add_path() (gfagraphs.graph.Graph method) C compute_backbone() (gfagraphs.nx.GFANetwork static method) compute_child_nodes() (gfagraphs.graph.Graph method) compute_neighbors() (gfagraphs.graph.Graph method) compute_networkx() (gfagraphs.nx.GFANetwork static method) compute_orientations() (gfagraphs.graph.Graph method) compute_parent_nodes() (gfagraphs.graph.Graph method) F futures_collector() (in module gfagraphs.graph) G get_edges() (gfagraphs.graph.Graph method) get_free_node_name() (gfagraphs.graph.Graph method) get_gfa_format() (gfagraphs.gfaparser.GFAParser static method) get_gfa_type() (gfagraphs.gfaparser.GFAParser static method) get_in_edges() (gfagraphs.graph.Graph method) get_most_external_nodes() (gfagraphs.nx.GFANetwork method) get_next_unused_node_name() (gfagraphs.graph.Graph method) get_out_edges() (gfagraphs.graph.Graph method) get_palette() (in module gfagraphs.nx) get_python_type() (gfagraphs.gfaparser.GFAParser static method) GFAFormat (class in gfagraphs.abstractions) gfagraphs.abstractions module gfagraphs.gfaparser module gfagraphs.graph module gfagraphs.nx module GFALine (class in gfagraphs.abstractions) GFANetwork (class in gfagraphs.nx) GFAParser (class in gfagraphs.gfaparser) global_offset() (gfagraphs.graph.Graph method) Graph (class in gfagraphs.graph) M merge_segments() (gfagraphs.graph.Graph method) module gfagraphs.abstractions gfagraphs.gfaparser gfagraphs.graph gfagraphs.nx O Orientation (class in gfagraphs.abstractions) P path_allocator() (in module gfagraphs.gfaparser) R read_gfa_line() (gfagraphs.gfaparser.GFAParser static method) reconstruct_sequences() (gfagraphs.graph.Graph method) rename_node() (gfagraphs.graph.Graph method) revcomp() (in module gfagraphs.graph) reverse() (in module gfagraphs.abstractions) S save_graph() (gfagraphs.gfaparser.GFAParser static method) (gfagraphs.graph.Graph method) save_subgraph() (gfagraphs.gfaparser.GFAParser static method) sequence_offsets() (gfagraphs.graph.Graph method) set_gfa_type() (gfagraphs.gfaparser.GFAParser static method) split_segments() (gfagraphs.graph.Graph method) supplementary_datas() (gfagraphs.gfaparser.GFAParser static method) U unfold() (gfagraphs.graph.Graph method)